MEIDNet: Multimodal generative AI framework for inverse materials design

Babu, Anand;  Gouvêa, Rogério;  Vandergheynst, Pierre;  Rignanese, Gian-Marco 

Interpretable inflammation landscape of circulating immune cells

Jiménez-Gracia, Laura;  Maspero, Davide;  Aguilar-Fernández, Sergio;  Craighero, Francesco;  Boulougouri, Maria;  Ruiz, Max;  Marchese, Domenica;  Caratù, Ginevra;  Liñares-Blanco, Jose;  Berasategi, Miren;  Ramirez Flores, Ricardo O.;  Sanzo-Machuca, Angela;  Corraliza, Ana M.;  Tran, Hoang A.;  Normand, Rachelly;  Nestor, Jacquelyn;  Hong, Yourae;  Kole, Tessa;  van der Velde, Petra;  Alleblas, Frederique;  Pedretti, Flaminia;  Aterido, Adrià;  Banchero, Martin;  Soriano, German;  Román, Eva;  van den Berge, Maarten;  Salas, Azucena;  Carrascosa, Jose Manuel;  Fernández Nebro, Antonio;  Domènech, Eugeni;  Cañete, Juan;  Tornero, Jesús;  Gisbert, Javier P.;  Choy, Ernest;  Girolomoni, Giampiero;  Siegmund, Britta;  Julià, Antonio;  Serra, Violeta;  Elosua, Roberto;  Tejpar, Sabine;  Vidal, Silvia;  Nawijn, Martijn C.;  Gut, Ivo;  Saez-Rodriguez, Julio;  Marsal, Sara;  Villani, Alexandra-Chloé;  Nieto, Juan C.;  Heyn, Holger 

Data-Driven Transport Geometry for Rare Events in Metastable Systems

Kawasaki-Borruat, Victor;  Vandergheynst, Pierre 

Irregularities of Latent Space Geometry in Diffusion Models

Alexander Lobashev;  Dmitry Guskov;  Maria Larchenko;  Kawasaki-Borruat, Victor 

Carré du champ flow matching: better quality-generalisation tradeoff in generative models

Bamberger, Jacob;  Jones, Iolo;  Duncan, Dennis;  Bronstein, Michael;  Vandergheynst, Pierre;  Gosztolai, Adám 

Beyond Ensembles: Simulating All-Atom Protein Dynamics in a Learned Latent Space

Sengar, Aditya;  Zhang, Jiying;  Vandergheynst, Pierre;  Barth, Patrick 

Learning on Graphs with Long-Range Dependencies: Methods and Applications

Hariri, Ali 

Interpretable representation learning for biological data: from small molecules to genes

Boulougouri, Maria 

Interpretable Deep Learning for Elucidating Translation Elongation Dynamics

Nallapareddy, Mohan Vamsi 

Determining risks of having or developing medical conditions based on radiomics features extracted from automatically segmented 3d images of a skeletal muscle of a subject's trunk

NACHIT, Maxime;  EL ALAM, Gabi 

The Spectral Graph Wavelet Transform: Fundamental Theory and Fast Computation

Hammond, David K.;  Vandergheynst, Pierre;  Gribonval, Rémi 

Diffusion Processes on Implicit Manifolds

Kawasaki-Borruat, Victor;  Grotehans, Clara;  Gosztolai, Adam;  Vandergheynst, Pierre 

Advection-Diffusion on Graphs: A Bakry-Émery Laplacian for Spectral Graph Neural Networks

Berlureau, Pierre-Gabriel;  Hariri, Ali;  Kawasaki-Borruat, Victor;  Zosso, Mia;  Vandergheynst, Pierre 

Position: Message-passing and spectral GNNs are two sides of the same coin

Vasileiou, Antonis;  Cervino, Juan;  Frossard, Pascal;  Kanatsoulis, Charilaos;  Morris, Christopher;  Schaub, Michael;  Vandergheynst, Pierre;  Wang, Zhiyang;  Wolf, Guy;  Levie, Ron 

Learning gene interactions from tabular gene expression data using Graph Neural Networks

Boulougouri, Maria;  Nallapareddy, Mohan Vamsi;  Vandergheynst, Pierre 

Conditional Deep Learning Model Reveals Translation Elongation Determinants during Amino Acid Deprivation

Nallapareddy, Mohan Vamsi;  Craighero, Francesco;  Worpenberg, Lina;  Naef, Felix;  Gobet, Cédric;  Vandergheynst, Pierre 

Interpreting and comparing neural activity across systems by geometric deep learning

Gosztolai, Adam;  Vandergheynst, Pierre 

A comparative analysis of gene expression profiling by statistical and machine learning approaches

Bontonou, Myriam;  Haget, Anais;  Boulougouri, Maria;  Audit, Benjamin;  Borgnat, Pierre;  Arbona, Jean-Michel 

MARBLE: interpretable representations of neural population dynamics using geometric deep learning

Gosztolai, Adam;  Peach, Robert L.;  Arnaudon, Alexis;  Barahona, Mauricio;  Vandergheynst, Pierre 

Caffarelli Regularity and Hierarchical Phase Boundaries in Diffusion Model Latent Space

Lobashev, Alexander;  Guskov, Dmitry;  Borruat, Victor;  Larchenko, Maria 

On Vanishing Gradients, Over-Smoothing, and Over-Squashing in GNNs: Bridging Recurrent and Graph Learning

Arroyo, Álvaro;  Gravina, Alessio;  Gutteridge, Benjamin;  Barbero, Federico;  Gallicchio, Claudio;  Dong, Xiaowen;  Bronstein, Michael;  Vandergheynst, Pierre 

Return of ChebNet: Understanding and Improving an Overlooked GNN on Long Range Tasks

Hariri, Ali;  Alvaro Arroyo;  Alessio Gravina;  Moshe Eliasof;  Davide Bacciu;  Carola-Bibiane Schönlieb;  Kamyar Azizzadenesheli;  Xiaowen Dong;  Vandergheynst, Pierre 

Beyond Ensembles: Simulating All-Atom Protein Dynamics in a Learned Latent Space

Sengar, Aditya;  Hariri, Ali;  Vandergheynst, Pierre;  Barth, Patrick 

Generative Modeling of Full-Atom Protein Conformations using Latent Diffusion on Graph Embeddings

Sengar, Aditya;  Hariri, Ali;  Probst, Daniel;  Barth, Patrick;  Vandergheynst, Pierre 

Exploring Query-to-reference Mapping Challenges for Automated Single-Cell Atlas-based Diagnostics

Craighero, Francesco;  Maspero, Davide;  Jiménez-Gracia, Laura;  Aguilar-Fernández, Sergio;  Boulougouri, Maria;  Nieto, Juan;  Heyn, Holger 

Boosting Protein Graph Representations through Static-Dynamic Fusion

Guo, Pengkang;  Ferreira de Sousa Correia, Bruno;  Vandergheynst, Pierre;  Probst, Daniel 

Bridging Graph Neural Networks and Large Language Models: A Survey and Unified Perspective

Arroyo, Álvaro;  Barbero, Federico;  Blayney, Hugh;  Bronstein, Michael;  Dong, Xiaowen;  Liò, Pietro;  Pascanu, Razvan;  Vandergheynst, Pierre 

Learning on compressed molecular representations

Weinreich, Jan;  Probst, Daniel 

Exploring “dark-matter” protein folds using deep learning

Harteveld, Zander;  Van Hall-Beauvais, Alexandra;  Morozova, Irina;  Southern, Joshua;  Goverde, Casper;  Georgeon, Sandrine;  Rosset, Stéphane;  Defferrard, Michëal;  Loukas, Andreas;  Vandergheynst, Pierre;  Bronstein, Michael M.;  Correia, Bruno E. 

Molecular set representation learning

Boulougouri, Maria;  Vandergheynst, Pierre;  Probst, Daniel 

Algorithm 1044: PyGenStability, a Multiscale Community Detection with Generalized Markov Stability

Arnaudon, Alexis;  Schindler, Dominik J.;  Peach, Robert L.;  Gosztolai, Adam;  Hodges, Maxwell;  Schaub, Michael T.;  Barahona, Mauricio 

Graph rewiring for long range-aware protein learning

Hariri, Ali;  Vandergheynst, Pierre 

Electroacoustic Liner for tonal and broadband noise attenuation of turbofans

De Bono, Emanuele;  Collet, Manuel;  Ouisse, Morvan;  Lissek, Hervé;  Billon, Kevin;  Volery, Maxime;  Sergeev, Stanislav;  Mardjono, Jacky 

Ultrabroadband sound control of 3D spaces using plasmacoustic metalayers

Sergeev, Stanislav;  Donaldson, Mark;  Lissek, Hervé 

Graph learning for capturing long-range dependencies in protein structures

Hariri, Ali;  Vandergheynst, Pierre 

Implicit Gaussian Process Representation of Vector Fields Over Arbitrary Latent Mani-Folds

Peach, Robert;  Vinao-Carl, Matteo;  Grossman, Nir;  David, Michael;  Mallas, Emma;  Sharp, David;  Malhotra, Paresh;  Vandergheynst, Pierre;  Gosztolai, Adám 

Beyond fine-tuning: LoRA modules boost near-OOD detection and LLM security

Salimbeni, Etienne;  Craighero, Francesco;  Khasanova, Renata;  Vasic, Milos;  Vandergheynst, Pierre 

Electro-active acoustic liner for the reduction of turbofan noise

Salze, Edouard;  De Bono, Emanuele;  Billon, Kévin;  Gillet, Martin;  Volery, Maxime;  Collet, Manuel;  Ouisse, Morvan;  Lissek, Hervé;  Mardjono, Jacky 

Corona-discharge acoustic transducer as a perfect matched acoustic source

Vesal, Rahim;  Lissek, Hervé 

Advection Boundary Law for sound transmission attenuation of plane and spinning guided modes

De Bono, Emanuele;  Collet, Manuel;  Salze, Eduoard;  Ouisse, Morvan;  Gillet, Martin;  Lissek, Hervé;  Mardjono, Jacky;  Billon, Kévin;  Volery, Maxime 

Initial Conditions Impact on Nonlinear Dynamics of a Loudspeaker

Vesal, Rahim;  Guo, Xinxin;  Lissek, Hervé 

Towards improving full-length ribosome density prediction by bridging sequence and graph-based representations

Nallapareddy, Mohan Vamsi;  Craighero, Francesco;  Naef, Felix;  Gobet, Cédric;  Vandergheynst, Pierre 

Smart Acoustic Lining for UHBR Technologies Engine Part 1: Design of an Electroacoustic Liner and Experimental Characterization Under Flow in Rectangular Cross-Section Ducts

De Bono Emanuele;  Collet, Manuel;  Billon, Kevin;  Salze, Edouard;  Lissek, Hervé;  Volery, Maxime;  Ouisse, Morvan;  Marjono, Jacky 

The Advection Boundary Law in presence of mean-flow and spinning modes

Beyond fine-tuning: LoRA modules boost near-OOD detection and LLM security

Salimbeni, Etienne;  Craighero, Francesco;  Khasanova, Renata;  Vasic, Milos;  Vandergheynst, Pierre 

Infusing structured knowledge priors in neural models for sample-efficient symbolic reasoning

Atzeni, Mattia 

Safe Deep Neural Networks

Matoba, Kyle Michael 

Design of unprecedented sound sources: A dream come true with plasma loudspeakers?

Wang, Tirui 

Effects of Head-Tracking Artefacts on Externalization and Localization in Azimuth With Binaural Wearable Devices

Grimaldi, Vincent;  Simon, Laurent S. R.;  Courtois, Gilles;  Lissek, Herve 

Active Acoustic Su-Schrieffer-Heeger-Like Metamaterial

Padlewski, Mathieu François;  Volery, Maxime;  Fleury, Romain;  Lissek, Hervé;  Guo, Xinxin 

Ultrabroadband sound control with deep-subwavelength plasmacoustic metalayers

Sergeev, Stanislav;  Fleury, Romain;  Lissek, Hervé 

Observation of non-reciprocal harmonic conversion in real sounds

Guo, Xinxin;  Lissek, Hervé;  Fleury, Romain 

Aiming beyond slight increases in accuracy

Probst, Daniel 

Robust direct acoustic impedance control using two microphones for mixed feedforward-feedback controller

Volery, Maxime;  Guo, Xinxin;  Lissek, Herve 

Alchemical analysis of FDA approved drugs

Orsi, Markus;  Probst, Daniel;  Schwaller, Philippe;  Reymond, Jean-Louis 

The Societal and Scientific Importance of Inclusivity, Diversity, and Equity in Machine Learning for Chemistry

Probst, Daniel 

An explainability framework for deep learning on chemical reactions exemplified by enzyme-catalysed reaction classification

Probst, Daniel 

Smart acoustic lining for UHBR technologies engine: from the design of an electroacoustic metasurface to experimental characterization under flow

Billon, K.;  Gillet, M.;  Salze, E.;  Volery, Maxime;  De Bono, E.;  Ouisse, M.;  Lissek, Hervé;  Collet, Manuel;  Mardjono, J. 

Plasma-Based Acoustic Metalayer for Sound Control

Sergeev, Stanislav;  Lissek, Hervé 

Regulating Artificial Intelligence in the EU, United States and China - Implications for energy systems

Heymann, Fabian;  Parginos, Konstantinos;  Hariri, Ali;  Franco, Gabriele 

Programmable Electroacoustic Boundaries in Acoustic Waveguides: Enhanced Attenuation and Non-Reciprocal Sound Propagation

De Bono, Emanuele;  Ouisse, Morvan;  Collet, Manuel;  Salze, Edouard;  Lissek, Hervé;  Volery, Maxime;  Mardjono, Jacky 

Probabilistic methods for neural combinatorial optimization

Karalias, Nikolaos 

Robust tunable acoustic impedance control on electroacoustic resonators for aircraft noise reduction

Volery, Maxime 

Interpretable Inflammation Landscape of Circulating Immune cells

Jiménez-Gracia, Laura;  Maspero, Davide;  Aguilar-Fernández, Sergio;  Craighero, Francesco;  Ruiz, Sara;  Marchese, Domenica;  Caratù, Ginevra;  Elosua-Bayes, Marc;  Abdalfatah, Mohamed;  Sanzo-Machuca, Angela;  Corraliza, Ana M.;  Massoni-Badosa, Ramon;  Tran, Hoang A.;  Normand, Rachelly;  Nestor, Jacquelyn;  Hong, Yourae;  Kole, Tessa;  van der Velde, Petra;  Alleblas, Frederique;  Pedretti, Flaminia;  Aterido, Adrià;  Banchero, Martin;  Soriano, German;  Román, Eva;  van den Berge, Maarten;  Salas, Azucena;  Carrascosa, Jose Manuel;  Nebro, Antonio Fernández;  Domènech, Eugeni;  Cañete, Juan;  Tornero, Jesús;  Pérez-Gisbert, Javier;  Choy, Ernest;  Girolomoni, Giampiero;  Siegmund, Britta;  Julià, Antonio;  Serra, Violeta;  Elosua, Roberto;  Tejpar, Sabine;  Vidal, Silvia;  Nawijn, Martijn C.;  Marsal, Sara;  Vandergheynst, Pierre;  Villani, Alexandra-Chloé;  Nieto, Juan C.;  Heyn, Holger 

Parameter-Free Molecular Classification and Regression with Gzip

Weinreich, Jan;  Probst, Daniel 

Effect of time delay on the impedance control of a pressure-based, current-driven Electroacoustic Absorber

De Bono, E.;  Collet, M.;  Matten, G.;  Karkar, S.;  Lissek, H.;  Ouisse, M.;  Billon, K.;  Laurence, T.;  Volery, M. 

Human Head Yaw Estimation based on Two 3-axis Accelerometers

Grimaldi, V.;  Simon, L.S.R.;  Sans, M.;  Courtois, G.;  Lissek, H. 

Connecting the dots in ethology: applying network theory to understand neural and animal collectives

Gosztolai, Adam;  Ramdya, Pavan 

RosettaSurf-A surface-centric computational design approach

Scheck, Andreas;  Rosset, Stephane;  Defferrard, Michael;  Loukas, Andreas;  Bonet, Jaume;  Vandergheynst, Pierre;  Correia, Bruno E. 

In flow acoustic characterisation of a 2D active liner with local and non local strategies.

Billon, K.;  Bono, E. De;  Perez, M.;  Salze, E.;  Matten, G.;  Gillet, M.;  Ouisse, M.;  Volery, M.;  Lissek, H.;  Mardjono, J.;  Collet, M. 

PID-like active impedance control for electroacoustic resonators to design tunable single-degree-of-freedom sound absorbers

Guo, Xinxin;  Volery, Maxime;  Lissek, Hervé 

Corona discharge actuator as an active sound absorber under normal and oblique incidence

Sergeev, Stanislav;  Humbert, Thomas;  Lissek, Hervé;  Aurégan, Yves 

Learnable filter-banks for CNN-based audio applications

Peic Tukuljac, Helena;  Ricaud, Benjamin;  Aspert, Nicolas;  Colbois, Laurent 

SPECTRE: Spectral Conditioning Helps to Overcome the Expressivity Limits of One-shot Graph Generators

Martinkus, Karolis;  Loukas, Andreas;  Perraudin, Nathanael;  Wattenhofer, Roger 

Neural Set Function Extensions: Learning with Discrete Functions in High Dimensions

Karalias, Nikolaos;  Robinson, Joshua;  Loukas, Andreas;  Jegelka, Stefanie 

Generalised Implicit Neural Representations

Grattarola, Daniele;  Vandergheynst, Pierre 

Propagation on Multi-relational Graphs for Node Regression

Bayram, Eda 

Auditory externalization of a remote microphone signal

Grimaldi, Vincent Pierre Olivier 

Leveraging topology, geometry, and symmetries for efficient Machine Learning

Defferrard, Michaël 

Plasma-based Electroacoustic Actuator for Broadband Sound Absorption

Sergeev, Stanislav 

Development of a corona discharge loudspeaker prototype Master Thesis

Gomart, Maximilien 

Naviguer dans les traces numériques sur Twitter. Retour sur la conception d’un dispositif de cartographie de données à destination de journalistes

Carlino, Vincent;  Pignard-Cheynel, Nathalie;  Loubère, Lucie;  Ricaud, Benjamin;  Aspert, Nicolas 

Experimental assessment of an active (acoustic) liner prototype in an acoustic flow duct facility

Billon, Kevin;  De Bono, Emanuele;  Perez, Matthias;  Salze, Edouard;  Matten, Gaël;  Gillet, Martin;  Ouisse, Morvan;  Volery, Maxime;  Lissek, Hervé;  Mardjono, Jacky;  Collet, Manuel;  Fromme, Paul;  Su, Zhongqing 

Summary of Tutorials at The Web Conference 2021

West, Robert;  Bhagat, Smriti;  Groth, Paul;  Zitnik, Marinka;  Couto, Francisco M.;  Lisena, Pasquale;  Merono-Penuela, Albert;  Zhao, Xiangyu;  Fan, Wenqi;  Yin, Dawei;  Tang, Jiliang;  Shou, Linjun;  Gong, Ming;  Pei, Jian;  Geng, Xiubo;  Zhou, Xingjie;  Jiang, Daxin;  Ricaud, Benjamin;  Aspert, Nicolas;  Miz, Volodymyr;  Dy, Jennifer;  Ioannidis, Stratis;  Yildiz, Ilkay;  Rezapour, Rezvaneh;  Aref, Samin;  Dinh, Ly;  Diesner, Jana;  Drutsa, Alexey;  Ustalov, Dmitry;  Popov, Nikita;  Baidakova, Daria;  Mishra, Shubhanshu;  Gopalan, Arjun;  Juan, Da-Cheng;  Magalhaes, Cesar Ilharco;  Ferng, Chun-Sung;  Heydon, Allan;  Lu, Chun-Ta;  Pham, Philip;  Yu, George;  Fan, Yicheng;  Wang, Yueqi;  Laurent, Florian;  Schraner, Yanick;  Scheller, Christian;  Mohanty, Sharada;  Chen, Jiawei;  Wang, Xiang;  Feng, Fuli;  He, Xiangnan;  Teinemaa, Irene;  Albert, Javier;  Goldenberg, Dmitri;  Vasile, Flavian;  Rohde, David;  Jeunen, Olivier;  Benhalloum, Amine;  Sakhi, Otmane;  Rong, Yu;  Huang, Wenbing;  Xu, Tingyang;  Bian, Yatao;  Cheng, Hong;  Sun, Fuchun;  Huang, Junzhou;  Fakhraei, Shobeir;  Faloutsos, Christos;  Celebi, Onur;  Muller, Martin;  Schneider, Manuel;  Altunina, Olesia;  Wingerath, Wolfram;  Wollmer, Benjamin;  Gessert, Felix;  Succo, Stephan;  Ritter, Norbert;  Courdier, Evann;  Avram, Tudor Mihai;  Cvetinovic, Dragan;  Tsinadze, Levan;  Jose, Johny;  Howell, Rose;  Koenig, Mario;  Defferrard, Michael;  Kenthapadi, Krishnaram;  Packer, Ben;  Sameki, Mehrnoosh;  Sephus, Nashlie 

Business Entity Matching with Siamese Graph Convolutional Networks

Krivosheev, Evgeny;  Atzeni, Mattia;  Mirylenka, Katsiaryna;  Scotton, Paolo;  Miksovic, Christoph;  Zorin, Anton 

Node Attribute Completion in Knowledge Graphs with Multi-Relational Propagation

Bayram, Eda;  West, Robert;  Garcia Duran, Alberto 

Text-based RL Agents with Commonsense Knowledge: New Challenges, Environments and Baselines

Murugesan, Keerthiram;  Atzeni, Mattia;  Kapanipathi, Pavan;  Shukla, Pushkar;  Kumaravel, Sadhana;  Tesauro, Gerald;  Talamadupula, Kartik;  Sachan, Mrinmaya;  Campbell, Murray 

Partition and Code: learning how to compress graphs

Bouritsas, Giorgos;  Loukas, Andreas;  Karalias, Nikolaos;  Bronstein, Michael 

Efficient Text-based Reinforcement Learning by Jointly Leveraging State and Commonsense Graph Representations

Murugesan, Keerthiram;  Atzeni, Mattia;  Kapanipathi, Pavan;  Talamadupula, Kartik;  Sachan, Mrinmaya;  Campbell, Murray 

Sound Field Reconstruction in a room through Sparse Recovery and its application in Room Modal Equalization

Pham, Vu Thach 

Court-Circuit: Quartier mixte, autonome et émergent dans le Pays de Gex (Grand Genève)

Claus, Romain 

Connectome spectral analysis to track EEG task dynamics on a subsecond scale

Glomb, Katharina;  Queralt, Joan Rue;  Pascucci, David;  Defferrard, Michael;  Tourbier, Sebastien;  Carboni, Margherita;  Rubega, Maria;  Vulliemoz, Serge;  Plomp, Gijs;  Hagmann, Patric 

Localized Spectral Graph Filter Frames: A Unifying Framework, Survey of Design Considerations, and Numerical Comparison

Shuman, David I. 

Spikyball Sampling: Exploring Large Networks via an Inhomogeneous Filtered Diffusion

Ricaud, Benjamin;  Aspert, Nicolas;  Miz, Volodymyr 

Development of a plasma electroacoustic actuator for active noise control applications

Sergeev, S;  Lissek, H;  Howling, A;  Furno, I;  Plyushchev, G;  Leyland, P 

How hard is to distinguish graphs with graph neural networks?

Loukas, Andreas 

Probabilistic Deep Learning on Spheres for Weather/Climate Applications

Feng, Wentao 

Probabilistic Deep Learning on Spheres for Weather/Climate Applications

Haddad, Yann Yasser 

Social Network Architectures of Disinformation

Mekacher, Amin 

Musical Source Separation

Mocanu, Alexandru